miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|37255126|gb|BJ617938.1|BJ617938 CGGCACGAGGTCAGTTGGCATTACAGACCCCTGTGAAAGTGGCAACTTCAGGGTTCATACTGTCATGACTCTGGAGCAGC
AGGACATGGTTTGTTACACTGCCCAGACGTTGGTCCGAATTCTCTCACACGGAGGCTACAGGAAGATTTTGGGCCTGGAG
GGAGATGCCAGTGCTCTTGCCACTGAGATGTCCACCTGGGACGGTGTCATTGTGACCCCTTCAGAGAAGGCCTATGAGAA
GCCCCCTGAGAGGAAGGAAGGAGAGGAGGATGATAACCAGGAAATTCCAGAAGGTGCAGAAGAAGAGGAGAGTATGGAGA
CACAAGAGTGATGTCAAGTTAAAGATTTCACTTGTTCTGGATTCTCCCTGTACCAGCCCCGGGGCAGAACATATTGGGTC
TATTTCTGGACCAAACTCCTGTGGTTTTTTTTTTTCCTTTGTTCTTAACTTGNGATGNGACTTGTTTTATACTGNAGGGA
TATGTTGTTGTTTTTTTTGCCANCAATAAATTTT




Most similar to sp|Q6P8G1|ILF2_XENTR

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q6P8G1|ILF2_XENTR Interleukin enhancer-binding factor 2 homolog
           OS=Xenopus tropicalis GN=ilf2 PE=2 SV=1
          Length = 388

 Score =  183 bits (465), Expect = 4e-46
 Identities = 88/90 (97%), Positives = 90/90 (100%)
 Frame = +2

Query: 11  SVGITDPCESGNFRVHTVMTLEQQDMVCYTAQTLVRILSHGGYRKILGLEGDASALATEM 190
           SVGITDPCESGNFRVHTVMTLEQQDMVCYTAQTLVRILSHGG+RKILGLEGDASALATEM
Sbjct: 283 SVGITDPCESGNFRVHTVMTLEQQDMVCYTAQTLVRILSHGGFRKILGLEGDASALATEM 342

Query: 191 STWDGVIVTPSEKAYEKPPERKEGEEDDNQ 280
           STWDGVIVTPSEKAYEKPPERKEGEED+NQ
Sbjct: 343 STWDGVIVTPSEKAYEKPPERKEGEEDENQ 372